Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs36012762 chr6:25980523 A/C 7.66E-9 518 41.13 37.03 3.37 KM Plot
KIRC rs36020562 chr3:48258638 A/G 6.5E-5 514 39.7 41.27 21.12 KM Plot
KIRC rs36041861 chr10:81951351 A/G 1.61E-6 521 38.93 51.03 3.93 KM Plot
KIRC rs36064160 chr3:48243101 C/G 4.61E-5 512 39.7 41.27 21.12 KM Plot
KIRC rs36075665 chr3:48343087 C/T 3.51E-5 520 39.53 40.93 19.13 KM Plot
KIRC rs36093098 chr6:50833931 G/A 1.15E-6 521 39.85 43.8 11.35 KM Plot
KIRC rs36121690 chr3:48345511 C/T 3.23E-5 521 39.7 41.27 19.13 KM Plot
KIRC rs36126531 chr12:29427151 G/A 4.73E-8 526 40.6 38.57 6.07 KM Plot
KIRC rs368814012 chr6:26107589 GAT/G 6.57E-9 512 41.73 36.87 3.37 KM Plot
KIRC rs369348756 chr6:2389907 AGAG/A 1.07E-5 518 39.85 39.17 16.83 KM Plot
KIRC rs369744767 chr12:32920516 GC/G 4.61E-5 524 43.57 29.78 12.83 KM Plot
KIRC rs369812137 chr2:67561267 ACT/A 3.77E-7 522 39.23 37.73 2.03 KM Plot
KIRC rs372556191 chr19:54031599 ACAG/A 3.19E-5 523 39.08 44.93 19.27 KM Plot
KIRC rs3734504 chr6:2413792 A/T 2.24E-9 527 12.07 40.57 40 KM Plot
KIRC rs3734505 chr6:2413588 G/A 4.84E-8 526 39.7 40.6 12.25 KM Plot